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Full contents:

  • Introduction
  • Getting started
  • Tutorials
  • Concepts
  • Scripting
  • Deep learning
    • Deep Java Library
    • Bioimage Model Zoo
    • StarDist
  • Advanced
  • Reference
QuPath
  • Deep learning
  • Edit on GitHub

Deep learning

  • Deep Java Library
    • DJL engines
    • Getting started with QuPath + DJL
    • Using a DJL Model Zoo
    • Future plans
  • Bioimage Model Zoo
    • QuPath Bioimage Model Zoo extension
  • StarDist
    • Getting the StarDist extension
    • Getting pretrained models
    • Detecting nuclei
    • Customizing detection
    • Advanced options
    • Differences from StarDist Fiji
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